ngs

Command line utility for manipulating next-generation sequencing files.
Explore the docs »

Request Feature · Report Bug · ⭐ Consider starring the repo! ⭐

🎨 Features

• ngs derive. Forensic analysis tool useful in backwards computing information from next-generation sequencing data.
• ngs generate. Tool to generate next-generation sequencing files.
• ngs qc. Provides tools for checking the quality of next-generation sequencing files.

📚 Getting Started

Installation

bash cargo install ngs

🖥️ Development

To bootstrap a development environment, please use the following commands.

```bash

Clone the repository

git clone git@github.com:stjude-rust-labs/ngs.git cd ngs

Run the command line tool using cargo.

cargo run -- -h ```

🚧️ Tests

```bash

Run the project's tests.

cargo test

Ensure the project doesn't have any linting warnings.

cargo clippy ```

🤝 Contributing

Contributions, issues and feature requests are welcome! Feel free to check issues page.

📝 License

Copyright © 2021-Present St. Jude Children's Research Hospital. This project is MIT licensed.