A command line app to extract gene from genomic contigs. The program requires phyluce and its dependencies to run. Future update may interact directly with Lastz, BWA-MEM or both.
genx is a single executable command line app. The executable file will be available in the release link. Copy it to the folder that is registered in your PATH variable.
You can also install the app using the Rust package manager cargo:
Bash
cargo install genx
OS support:
Dependencies:
Phyluce and its depedencies (install here).
Subcommand options:
```Bash
USAGE:
genx
FLAGS: -h, --help Prints help information -V, --version Prints version information
SUBCOMMANDS: check Check dependencies extract Batch gene tree estimation using IQ-Tree help Prints this message or the help of the given subcommand(s) ```
Command options extract the gene:
```Bash
USAGE:
genx extract --dir
FLAGS: -h, --help Prints help information -V, --version Prints version information
OPTIONS:
-d, --dir