fibertools-rs

fibertools-rs a CLI tool for interacting with fiberseq bam files. The main utility is ft extract which extracts fiberseq data from a bam file into plain text.

```bash $ ft extract --help ft-extract 0.0.1 Extract fiberseq data into plain text files

USAGE: ft extract [OPTIONS] [BAM]

ARGS: fiberseq bam file [default: -]

OPTIONS: -r, --reference report in reference sequence coordinates -m, --m6a Output path for m6a bed12 -c, --cpg Output path for CpG (primrose) bed12 -m, --msp Output path for methylation sensitive patch (msp) bed12 -n, --nuc Output path for nucleosome bed12 -h, --help Print help information -V, --version Print version information ```