chainfile

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A crate for working with genomics chain files.
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Guiding Principles

This crate is written in the style of noodles, as it was originally intended to be included as a pull request. After discussion with the maintainer of noodles, we decided this should be its own, complimentary crate.

📚 Getting Started

To include this crate in your project, simply use the following command.

bash cargo add chainfile

You can take a look at the examples to get a sense of how to use the crate.

🖥️ Development

To bootstrap a development environment, please use the following commands.

```bash

Clone the repository

git clone git@github.com:stjude-rust-labs/chainfile.git cd chainfile

Build the crate in release mode

cargo build --release

List out the examples

cargo run --release --example ```

🚧️ Tests

Before submitting any pull requests, please make sure the code passes the following checks.

```bash

Run the project's tests.

cargo test --all-features

Ensure the project doesn't have any linting warnings.

cargo clippy --all-features

Ensure the project passes `cargo fmt`.

cargo fmt --check ```

Supported Rust Version (SRV)

This crate is designed to work with Rust version 1.68.0 or later. It may, by happenstance, work with earlier versions of Rust.

🤝 Contributing

Contributions, issues and feature requests are welcome! Feel free to check issues page.

📝 License

This project is licensed as either Apache 2.0 or MIT at your discretion.